Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • DNA variation3
    • Genetic variation3
    • Genomic variation3
    • Mutation3
    • Polymorphism3
    • Somatic mutations3
    • Antimicrobial stewardship1
    • Assembly1
    • Biological sequences1
    • DNA polymorphism1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microsatellites1
    • Molecular infection biology1
    • Molecular microbiology1
    • Personal genomics1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Synthetic genomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • Viral genomics1
    • Whole genomes1
    • snps1
    • Show N_FILTERS more
    • Tool
    • BWA
    • Galaxy13
    • BEDTools3
    • FreeBayes3
    • fastp3
    • lofreq3
    • Bwa-mem22
    • FastQC2
    • MultiQC2
    • QUAST2
    • SAMtools2
    • SRA Software Toolkit2
    • Vcflib2
    • snpEff2
    • BUSCO1
    • BamTools1
    • Circos1
    • Cutadapt1
    • Diamond1
    • GEMINI1
    • Galactic Circos1
    • GenomeScope 2.01
    • MAFFT1
    • Merqury1
    • Minimap21
    • RapidNJ1
    • SALSA1
    • Unicycler1
    • bx-python1
    • compute_sequence_length1
    • gfastats1
    • orfipy1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Variant Analysis3
    • Introduction to Galaxy Analyses1
    • Using Galaxy and Managing your Data1
    • collections1
    • covid191
    • microgalaxy1
    • one-health1
    • prokaryote1
    • virology1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko
    • Wolfgang Maier6
    • Anika Erxleben2
    • Daniel Blankenberg2
    • Dave Clements2
    • Marius van den Beek2
    • Alex Ostrovsky1
    • Anna Syme1
    • Ava Hoffman1
    • Björn Grüning1
    • Bérénice Batut1
    • David Salgado1
    • Enis Afgan1
    • Joachim Wolff1
    • Jörg Wennmann1
    • Katarzyna Kamieniecka1
    • Khaled Jum'ah1
    • Krzysztof Poterlowicz1
    • Mallory Freeberg1
    • Mo Heydarian1
    • Natalie Kucher1
    • Nick Stoler1
    • Pavankumar Videm1
    • Robert Meller1
    • Simon Gladman1
    • Timon Schlegel1
    • Tomas Klingström1
    • Torsten Houwaart1
    • Vivek Bhardwaj1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning5
    • Helena Rasche5
    • Nicola Soranzo5
    • Saskia Hiltemann5
    • Anton Nekrutenko4
    • Bérénice Batut4
    • Niall Beard4
    • William Durand4
    • Maria Doyle2
    • Mélanie Petera2
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Anthony Bretaudeau1
    • Armin Dadras1
    • Beatriz Serrano-Solano1
    • Dave Clements1
    • Gildas Le Corguillé1
    • John Davis1
    • Mateo Boudet1
    • Mehmet Tekman1
    • Nate Coraor1
    • Teresa Müller1
    • TheKharleeci1
    • Vijay1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: BWA

and Authors: Anton Nekrutenko

and Resource type: e-learning

5 e-learning materials found
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

    • beginner
    Genetic variation Variant Analysis covid19 one-health virology
  • e-learning

    Using dataset collections

    •• intermediate
    Using Galaxy and Managing your Data collections
  • e-learning

    NGS data logistics

    • beginner
    Introduction to Galaxy Analyses
  • e-learning

    Calling very rare variants

    • beginner
    Genetic variation Variant Analysis
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.