Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics17
    • Transcriptome17
    • Transcriptomics17
    • Show N_FILTERS more
    • Tool
    • Galaxy17
    • FastQC5
    • MultiQC5
    • RSeQC5
    • Cutadapt4
    • HISAT24
    • SAMtools4
    • STAR4
    • BEDTools3
    • GOseq3
    • pyGenomeTracks3
    • DeepTools2
    • FeatureCounts2
    • Heinz2
    • IsoformSwitchAnalyzeR2
    • PfamScan2
    • Salmon2
    • StringTie2
    • annotatemyids2
    • fastp2
    • gffcompare2
    • gffread2
    • ggplot22
    • rnaQUAST2
    • Biopython1
    • DESeq21
    • EGSEA1
    • Falco1
    • GOEnrichment1
    • MEME1
    • Peakachu1
    • R1
    • RCAS1
    • SRA Software Toolkit1
    • Subread1
    • Targetfinder.org1
    • Trimmomatic1
    • UMI-tools1
    • blockbuster1
    • fgsea1
    • limma1
    • miRDeep21
    • pathview1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training17
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics
    • microgalaxy29
    • biodiversity27
    • Single Cell25
    • Proteomics22
    • Genome Annotation18
    • Ecology17
    • Assembly14
    • Statistics and machine learning14
    • Microbiome12
    • Variant Analysis12
    • prokaryote12
    • Epigenetics11
    • jbrowse111
    • gmod10
    • Climate9
    • Computational chemistry8
    • Introduction to Galaxy Analyses8
    • eukaryote8
    • EBV dataset7
    • EBV workflow7
    • assembly7
    • one-health7
    • paper-replication7
    • Imaging6
    • MIGHTS6
    • Sequence analysis6
    • Using Galaxy and Managing your Data6
    • data management6
    • earth-system6
    • interactive-tools6
    • DDA5
    • covid195
    • cyoa5
    • label-TMT115
    • nanopore5
    • plants5
    • work-in-progress5
    • Genetic composition EBV class4
    • HeLa4
    • illumina4
    • mouse4
    • ocean4
    • pangeo4
    • workflows4
    • 10x3
    • 16S3
    • ChIP-seq3
    • Metabolomics3
    • QC3
    • RAD-seq3
    • amr3
    • bacteria3
    • data import3
    • gbif3
    • metabarcoding3
    • metagenomics3
    • metatranscriptomics3
    • modeling3
    • proteogenomics3
    • transcriptomics3
    • Community composition EBV class2
    • Evolution2
    • Species population EBV class2
    • Species populations EBV class2
    • Synthetic Biology2
    • Visualisation2
    • bulk2
    • climate2
    • collections2
    • ecology2
    • essential genes2
    • maker2
    • pacbio2
    • rna-seq2
    • taxonomic data2
    • virology2
    • CRISPR1
    • Contributing to the Galaxy Training Material1
    • DIA1
    • EBV workflowz1
    • Ecosystem EBV class1
    • Foundations of Data Science1
    • GO enrichment1
    • Heatmap1
    • ML1
    • Machine learning1
    • Marine ecosystems1
    • Materials Science1
    • Metabarcoding1
    • NDVI1
    • Nanopore data analysis1
    • Pan-cancer1
    • Pathogens detection1
    • Phylogenetic tree1
    • Remote sensing1
    • SILAC1
    • Species traits EBV class1
    • TMT1
    • VGP1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner15
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International17
    • Show N_FILTERS more
    • Target audience
    • Students17
    • Show N_FILTERS more
    • Author
    • Maria Doyle7
    • Belinda Phipson3
    • Cristóbal Gallardo3
    • Mallory Freeberg3
    • Pavankumar Videm3
    • Bérénice Batut2
    • Chao Zhang2
    • Harriet Dashnow2
    • Lucille Delisle2
    • Mo Heydarian2
    • Anika Erxleben1
    • Anna Trigos1
    • Beatriz Serrano-Solano1
    • Charity Law1
    • Clemens Blank1
    • Daniel Maticzka1
    • Florian Heyl1
    • Helena Rasche1
    • IGC Bioinformatics Unit1
    • Iacopo Cristoferi1
    • Jovana Maksimovic1
    • Marek Ostaszewski1
    • Matt Ritchie1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Nicola Soranzo1
    • Peter van Heusden1
    • Sanne Abeln1
    • Saskia Hiltemann1
    • Shian Su1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche
    • Saskia Hiltemann18
    • Björn Grüning16
    • Nicola Soranzo10
    • Bérénice Batut7
    • Cristóbal Gallardo6
    • Gildas Le Corguillé6
    • Lucille Delisle5
    • Maria Doyle5
    • Niall Beard4
    • Pavankumar Videm4
    • William Durand3
    • Wolfgang Maier3
    • Armin Dadras2
    • CicoZhang2
    • Mallory Freeberg2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Anthony Bretaudeau1
    • Beatriz Serrano-Solano1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Florian Heyl1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • IGC Bioinformatics Unit1
    • James Taylor1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Martin Čech1
    • Matti Hoch1
    • Mira Kuntz1
    • Mo Heydarian1
    • Nate Coraor1
    • Peter-Bram 't Hoen1
    • Sanjay Kumar Srikakulam1
    • Simon Bray1
    • Teresa Müller1
    • Xavier Garnier1
    • Show N_FILTERS more
    • Resource type
    • e-learning15
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Associated Training Datasets23
    • Quarto/RMarkdown Notebook2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: Transcriptomics

and Contributors: Helena Rasche

and Related resources: Associated Workflows

17 materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Network analysis with Heinz

    • beginner
    Transcriptomics metatranscriptomics network analysis
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    1: RNA-Seq reads to counts

    • beginner
    Transcriptomics QC collections mouse
  • e-learning

    2: RNA-seq counts to genes

    • beginner
    Transcriptomics QC limma-voom mouse
  • e-learning

    3: RNA-seq genes to pathways

    • beginner
    Transcriptomics mouse
  • e-learning

    GO Enrichment Analysis

    • beginner
    Transcriptomics
  • e-learning

    Visualization of RNA-Seq results with heatmap2

    • beginner
    Transcriptomics
  • e-learning

    CLIP-Seq data analysis from pre-processing to motif detection

    • beginner
    Transcriptomics
  • e-learning

    Differential abundance testing of small RNAs

    • beginner
    Transcriptomics
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.