Training materials
Contributors: Anthony Bretaudeau
and Related resources: Associated Workflows
and Difficulty level: Intermediate
11 materials found
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e-learning
Genome annotation with Braker3
•• intermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
e-learning
Genome annotation with Helixer
•• intermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy … -
e-learning
Genome annotation with Maker (short)
•• intermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenomics Genome Annotation eukaryote -
e-learning
Genome annotation with Funannotate
•• intermediateGenomics Gene and protein families Genome Annotation biodiversity eukaryote gmod jbrowse1 -
e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
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