Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Biological sequences3
    • Community analysis3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Sequence analysis3
    • Sequence databases3
    • Shotgun metagenomics3
    • Taxonomy3
    • Function analysis2
    • Functional analysis2
    • Metatranscriptomics2
    • Protein function analysis2
    • Protein function prediction2
    • Assembly1
    • Disease1
    • Epidemiology1
    • Pathology1
    • Public health1
    • Public health and epidemiology1
    • Sequence assembly1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy6
    • taxonomy_krona_chart4
    • MetaPhlAn3
    • MultiQC3
    • Cutadapt2
    • GraPhlAn2
    • KrakenTools2
    • SortMeRNA2
    • export2graphlan2
    • humann2
    • kraken22
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • Bakta1
    • BamTools1
    • Bandage1
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • FastTree1
    • Flye1
    • HUMAnN21
    • ISEScan1
    • Integron Finder1
    • JBrowse1
    • MLST1
    • Medaka1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • PlasmidFinder1
    • SAMtools1
    • dada21
    • fastp1
    • ggplot21
    • phyloseq1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy
    • Microbiome3
    • metatranscriptomics2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • cyoa1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Emma Leith2
    • Engy Nasr2
    • Paul Zierep2
    • Pratik Jagtap2
    • Praveen Kumar2
    • Ray Sajulga2
    • Saskia Hiltemann2
    • Subina Mehta2
    • Show N_FILTERS more
    • Contributor
    • Paul Zierep
    • Bérénice Batut9
    • Helena Rasche9
    • Saskia Hiltemann9
    • Björn Grüning8
    • Cristóbal Gallardo5
    • Anthony Bretaudeau3
    • Wolfgang Maier3
    • Bazante Sanders2
    • Christine Oger2
    • Deepti Varshney2
    • Engy Nasr2
    • Miaomiao Zhou2
    • Mélanie Petera2
    • Nate Coraor2
    • Teresa Müller2
    • Alex Ostrovsky1
    • Anton Nekrutenko1
    • Gildas Le Corguillé1
    • Hans-Rudolf Hotz1
    • Linelle Abueg1
    • Matúš Kalaš1
    • Niall Beard1
    • Nicola Soranzo1
    • Nuwan Goonasekera1
    • Peter van Heusden1
    • Polina Polunina1
    • Siyu Chen1
    • Verena Moosmann1
    • Vijay1
    • William Durand1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Paul Zierep

and Tools: FastQC

and Keywords: microgalaxy

3 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data (short)

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.