- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Algorithms55
- Computer programming55
- Data structures55
- Programming languages55
- Software development55
- Software engineering55
- Exomes34
- Genome annotation34
- Genomes34
- Genomics34
- Personal genomics34
- Synthetic genomics34
- Viral genomics34
- Whole genomes34
- Bottom-up proteomics31
- Discovery proteomics31
- MS-based targeted proteomics31
- MS-based untargeted proteomics31
- Metaproteomics31
- Peptide identification31
- Protein and peptide identification31
- Proteomics31
- Quantitative proteomics31
- Targeted proteomics31
- Top-down proteomics31
- Biological sequences26
- Sequence analysis26
- Sequence databases26
- Computational ecology25
- Ecoinformatics25
- Ecological informatics25
- Ecology25
- Ecosystem science25
- Bayesian methods23
- Biostatistics23
- Comparative transcriptomics23
- Descriptive statistics23
- Gaussian processes23
- Inferential statistics23
- Markov processes23
- Multivariate statistics23
- Probabilistic graphical model23
- Probability23
- Statistics23
- Statistics and probability23
- Transcriptome23
- Transcriptomics23
- Assembly22
- Sequence assembly22
- Community analysis18
- Environmental microbiology18
- Microbial ecology18
- Microbiome18
- Molecular community analysis18
- Metagenomics17
- Shotgun metagenomics17
- Antimicrobial stewardship16
- DNA variation16
- Genetic variation16
- Genomic variation16
- Medical microbiology16
- Microbial genetics16
- Microbial physiology16
- Microbial surveillance16
- Microbiological surveillance16
- Microbiology16
- Molecular infection biology16
- Molecular microbiology16
- Mutation16
- Polymorphism16
- Somatic mutations16
- Taxonomy13
- Biodiversity11
- Diffraction experiment9
- Exometabolomics9
- Imaging9
- LC-MS-based metabolomics9
- MS-based metabolomics9
- MS-based targeted metabolomics9
- MS-based untargeted metabolomics9
- Mass spectrometry-based metabolomics9
- Metabolites9
- Metabolome9
- Metabolomics9
- Metabonomics9
- Microscopy9
- Microscopy imaging9
- NMR-based metabolomics9
- Optical super resolution microscopy9
- Photonic force microscopy9
- Photonic microscopy9
- Computational chemistry8
- Epigenomics8
- Epidemiology6
- Public health6
- Public health and epidemiology6
- Communicable disease5
- DNA metabarcoding5
- De novo genome sequencing5
- Environmental metabarcoding5
- Show N_FILTERS more
-
-
-
Tool
- Galaxy257
- FastQC24
- SAMtools23
- MultiQC18
- fastp16
- BWA15
- BEDTools12
- SCANPY12
- Cutadapt11
- scikit-learn11
- DeepTools10
- JBrowse10
- BLAST9
- QUAST9
- BUSCO8
- Falco8
- GEMINI8
- Trimmomatic8
- ggplot28
- kraken28
- taxonomy_krona_chart8
- FreeBayes7
- NanoPlot7
- STAR7
- BCFtools6
- BamTools6
- Bandage6
- MaxQuant6
- msConvert6
- seqtk6
- FASTX-Toolkit5
- Flye5
- HISAT25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Open Babel5
- RStudio5
- Workflow4Metabolomics5
- annotatemyids5
- Biopython4
- Bowtie 24
- Bwa-mem24
- Diamond4
- Galactic Circos4
- KrakenTools4
- MAFFT4
- MetaPhlAn4
- Minimap24
- RSeQC4
- UniProt4
- anndata4
- compute_sequence_length4
- gffread4
- mothur4
- xcms4
- Bracken3
- Cardinal3
- DropletUtils3
- GOseq3
- Galaxy Image Analysis3
- GenomeScope 2.03
- InterProScan (EBI)3
- MSstats3
- Merqury3
- Newick Utilities3
- QualiMap3
- RDKit3
- SRA Software Toolkit3
- Salmon3
- Stacks3
- The Protein Data Bank (PDB)3
- Unicycler3
- Unipept3
- bx-python3
- gfastats3
- lofreq3
- scikit-image3
- snippy3
- snpEff3
- Apollo2
- Bio3D2
- COMBAT-TB Workbench2
- CellProfiler2
- Circos2
- Clustal 1.8 (Clustal W, Clustal X)2
- DESeq22
- FeatureCounts2
- GOEnrichment2
- GraPhlAn2
- Gromacs2
- HUMAnN22
- MACS2
- MDAnalysis2
- MEGAHIT2
- MEME2
- Medaka2
- OMArk2
- R2
- Racon2
- Recentrifuge2
- RepeatMasker2
- Show N_FILTERS more
-
-
-
Content provider
- Galaxy Training431
- Show N_FILTERS more
-
-
-
Keyword
- jupyter-notebook41
- Foundations of Data Science39
- biodiversity39
- Galaxy Server administration36
- microgalaxy33
- Single Cell32
- Proteomics31
- Ecology25
- Transcriptomics23
- Statistics and machine learning22
- Contributing to the Galaxy Training Material20
- Using Galaxy and Managing your Data20
- ansible19
- interactive-tools19
- Genome Annotation18
- git-gat18
- Assembly16
- Variant Analysis16
- Teaching and Hosting Galaxy training15
- Microbiome14
- Development in Galaxy13
- Climate12
- FAIR Data, Workflows, and Research12
- jbrowse112
- prokaryote12
- work-in-progress12
- MIGHTS11
- earth-system11
- elixir11
- gmod11
- paper-replication11
- Introduction to Galaxy Analyses10
- cyoa10
- DDA9
- Imaging9
- Metabolomics9
- eukaryote9
- one-health9
- plants9
- Computational chemistry8
- Epigenetics8
- Sequence analysis8
- assembly8
- covid198
- data management8
- fair8
- EBV dataset7
- EBV workflow7
- collections7
- ocean7
- 10x6
- nanopore6
- train-the-trainers6
- transcriptomics6
- workflows6
- Galaxy Community Building5
- R5
- SQL5
- ai-ml5
- data stewardship5
- deploying5
- jobs5
- label-TMT115
- metagenomics5
- rmarkdown-notebook5
- ro-crate5
- 16S4
- Genetic composition EBV class4
- HeLa4
- QC4
- illumina4
- metabarcoding4
- mouse4
- pangeo4
- virology4
- ChIP-seq3
- DIA3
- RAD-seq3
- Synthetic Biology3
- Visualisation3
- amr3
- apollo23
- bacteria3
- bash3
- bioimaging3
- bulk3
- data import3
- ecology3
- gbif3
- human3
- metatranscriptomics3
- modeling3
- monitoring3
- open3
- pacbio3
- proteogenomics3
- rna-seq3
- taxonomic data3
- Community composition EBV class2
- Evolution2
- Show N_FILTERS more
-
-
-
Difficulty level
- Beginner340
- Intermediate78
- Advanced13
- Show N_FILTERS more
-
-
-
Target audience
- Students342
- Galaxy Administrators49
- Instructors40
- Show N_FILTERS more
-
-
-
Author
- Helena Rasche84
- Bérénice Batut64
- Saskia Hiltemann36
- Björn Grüning24
- Anton Nekrutenko22
- Fotis E. Psomopoulos21
- The Carpentries20
- Yvan Le Bras19
- Wendi Bacon17
- Anthony Bretaudeau15
- Subina Mehta15
- Marie Josse14
- Simon Gladman14
- Bazante Sanders12
- Simon Bray12
- Wolfgang Maier12
- Anne Fouilloux11
- Julia Jakiela11
- Mehmet Tekman11
- Katarzyna Kamieniecka10
- Krzysztof Poterlowicz10
- Maria Doyle10
- Nicola Soranzo10
- Pratik Jagtap10
- Anup Kumar9
- Cristóbal Gallardo9
- Delphine Lariviere9
- Marius van den Beek9
- Melanie Föll9
- Nate Coraor9
- Avans Hogeschool8
- Pavankumar Videm8
- Timothy J. Griffin8
- Anika Erxleben7
- Daniel Blankenberg7
- Dave Clements7
- Donny Vrins7
- Florian Christoph Sigloch7
- Lucille Delisle7
- Paul Zierep7
- Praveen Kumar7
- Allegra Via6
- Anna Syme6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Emma Leith6
- Khaled Jum'ah6
- Matthias Fahrner6
- Patricia Palagi6
- Alex Ostrovsky5
- Christopher Barnett5
- Clemens Blank5
- Dechen Bhuming5
- Erwan Corre5
- James Johnson5
- Joachim Wolff5
- John Chilton5
- John Davis5
- Katherine Do5
- Ray Sajulga5
- Stéphanie Robin5
- Alexandre Cormier4
- Alireza Khanteymoori4
- Anne Pajon4
- Kaivan Kamali4
- Laura Leroi4
- Mallory Freeberg4
- Mira Kuntz4
- Morgan Howells4
- Simone Leo4
- Vivek Bhardwaj4
- Beatriz Serrano-Solano3
- Diana Chiang Jurado3
- Fidel Ramirez3
- Florian Heyl3
- Gianmauro Cuccuru3
- Gildas Le Corguillé3
- Guillaume Gricourt3
- Hans-Rudolf Hotz3
- Helge Hecht3
- Ioana Popescu3
- Jean-Loup Faulon3
- Joan Hérisson3
- Kenza Bazi-Kabbaj3
- Laura Cooper3
- Leonid Kostrykin3
- Maria Christina Maniou3
- Marie Crane3
- Marisa Loach3
- Matthias Bernt3
- Mo Heydarian3
- Mélanie Petera3
- Nadia Goué3
- Nuwan Goonasekera3
- Sofoklis Keisaris3
- Tharindu Senapathi3
- Thomas Duigou3
- Toby Hodges3
- Workflow4Metabolomics core team3
- Alex Mahmoud2
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann
- Helena Rasche391
- Björn Grüning320
- Bérénice Batut196
- Nicola Soranzo110
- Martin Čech90
- Anthony Bretaudeau83
- Niall Beard65
- Wendi Bacon62
- Armin Dadras57
- Marius van den Beek54
- Nate Coraor52
- Cristóbal Gallardo49
- Gildas Le Corguillé48
- Teresa Müller40
- Lucille Delisle38
- William Durand38
- Mehmet Tekman37
- Pavankumar Videm35
- Simon Gladman35
- Wolfgang Maier34
- Yvan Le Bras34
- Melanie Föll31
- Beatriz Serrano-Solano29
- Simon Bray25
- Subina Mehta25
- Anup Kumar23
- Donny Vrins23
- Peter van Heusden23
- Maria Doyle22
- Bazante Sanders19
- Julia Jakiela19
- Anton Nekrutenko16
- Deepti Varshney16
- Khaled Jum'ah16
- Anne Fouilloux15
- Mélanie Petera13
- Pratik Jagtap13
- Timothy J. Griffin13
- Marie Josse12
- Pablo Moreno12
- Delphine Lariviere11
- Matthias Bernt11
- Paul Zierep11
- Gianmauro Cuccuru10
- Mira Kuntz10
- David López9
- Marisa Loach9
- Stéphanie Robin9
- Katarzyna Kamieniecka8
- Leonid Kostrykin8
- Verena Moosmann8
- Mallory Freeberg7
- Anna Syme6
- Bert Droesbeke6
- Christopher Barnett6
- Clemens Blank6
- Enis Afgan6
- Florian Christoph Sigloch6
- Hans-Rudolf Hotz6
- Linelle Abueg6
- Morgan Howells6
- Alireza Khanteymoori5
- Clea Siguret5
- Dave Clements5
- Ekaterina Polkh5
- John Chilton5
- John Davis5
- Kaivan Kamali5
- Tomas Klingström5
- Wandrille Duchemin5
- olisand5
- Alexandre Cormier4
- Coline Royaux4
- Diana Chiang Jurado4
- Eli Chadwick4
- Fotis E. Psomopoulos4
- Alex Ostrovsky3
- Amirhossein Naghsh Nilchi3
- Catherine Bromhead3
- Daniela Schneider3
- Engy Nasr3
- Fabio Cumbo3
- Florian Heyl3
- Jasper Ouwerkerk3
- Krzysztof Poterlowicz3
- Maria Christina Maniou3
- Mateusz Kuzak3
- Miaomiao Zhou3
- Nuwan Goonasekera3
- Phil Reed3
- Riccardo Massei3
- Sofoklis Keisaris3
- Timon Schlegel3
- Ahmed Hamid Awan2
- Andrea Bagnacani2
- Anika Erxleben2
- Camila Goclowski2
- Carlos Chee Mendonça2
- Christine Oger2
- Show N_FILTERS more
-
-
-
Resource type
- e-learning
- slides84
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets273
- Associated Workflows225
- Quarto/RMarkdown Notebook110
- Jupyter Notebook (with Solutions)37
- Jupyter Notebook (without Solutions)37
- ansible19
- git-gat18
- jobs5
- deploying3
- monitoring3
- ro-crate3
- collections2
- cyoa2
- kubernetes2
- networking2
- storage2
- wireguard2
- workflows2
- Community1
- DDA1
- ENA1
- FAIR1
- SIG1
- apollo21
- authentication1
- automation1
- beacon1
- broken1
- cloud1
- data1
- features1
- ga4gh1
- gmod1
- interactive-tools1
- systemd1
- tags1
- terraform1
- tools1
- training1
- work-in-progress1
- Show N_FILTERS more
-
- Show disabled materials
- Show archived materials
