Training materials
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e-learning
Tree thinking for tuberculosis evolution and epidemiology
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote -
e-learning
Removal of human reads from SARS-CoV-2 sequencing data
•• intermediateSequence analysis covid19 -
e-learning
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Data Libraries
• beginnerGalaxy Server administration ansible git-gat storage -
e-learning
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
••• advancedGenetic variation Variant Analysis cyoa -
e-learning
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology