Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Sequence assembly
    • Computational ecology20
    • Ecoinformatics20
    • Ecological informatics20
    • Ecology20
    • Ecosystem science20
    • Exomes8
    • Genome annotation8
    • Genomes8
    • Genomics8
    • Personal genomics8
    • Synthetic genomics8
    • Viral genomics8
    • Whole genomes8
    • Assembly6
    • Biodiversity5
    • Antimicrobial stewardship1
    • Biological sequences1
    • Comparative genomics1
    • Data mining1
    • Function analysis1
    • Functional analysis1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Low complexity sequences1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Mitochondria1
    • Molecular infection biology1
    • Molecular microbiology1
    • Nucleic acid repeats1
    • Pattern recognition1
    • Phylogenetic clocks1
    • Phylogenetic dating1
    • Phylogenetic simulation1
    • Phylogenetic stratigraphy1
    • Phylogeny1
    • Phylogeny reconstruction1
    • Protein families1
    • Protein function analysis1
    • Protein function prediction1
    • Protein repeats1
    • Protein sequence classification1
    • Protein sequence features1
    • Protein sequence repeats1
    • Protein sites, features and motifs1
    • Repeat sequences1
    • Sequence analysis1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence databases1
    • Sequence repeats1
    • Signal peptide cleavage sites1
    • Show N_FILTERS more
    • Tool
    • Galaxy6
    • BUSCO2
    • Bandage2
    • Flye2
    • GenomeScope 2.02
    • Minimap22
    • NanoPlot2
    • gfastats2
    • BLAST1
    • BWA1
    • Bwa-mem21
    • Diamond1
    • FastQC1
    • Medaka1
    • Merqury1
    • MultiQC1
    • QUAST1
    • Racon1
    • SAMtools1
    • Smudgeplots1
    • Unicycler1
    • fastp1
    • kraken21
    • pilon1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training6
    • Show N_FILTERS more
    • Keyword
    • biodiversity
    • Assembly15
    • microgalaxy9
    • assembly5
    • prokaryote4
    • jbrowse13
    • nanopore3
    • plants3
    • Microbiome2
    • Variant Analysis2
    • gmod2
    • metagenomics2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • QC1
    • amr1
    • animals1
    • binning1
    • cyoa1
    • genome1
    • illumina1
    • polishing1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate7
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students6
    • Show N_FILTERS more
    • Author
    • Delphine Lariviere4
    • Anna Syme2
    • Anton Nekrutenko1
    • Cristóbal Gallardo1
    • Fabian Recktenwald1
    • Simon Gladman1
    • Tom Brown1
    • Show N_FILTERS more
    • Contributor
    • Bérénice Batut6
    • Björn Grüning5
    • Saskia Hiltemann5
    • Deepti Varshney4
    • Cristóbal Gallardo3
    • Delphine Lariviere3
    • Helena Rasche3
    • Teresa Müller3
    • Anna Syme2
    • Anthony Bretaudeau2
    • Anton Nekrutenko1
    • Enis Afgan1
    • Gildas Le Corguillé1
    • Niall Beard1
    • Nicola Soranzo1
    • Saim Momin1
    • Solenne Correard1
    • Tom Brown1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows6
    • Associated Training Datasets5
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Difficulty level: Beginner

and Scientific topics: Sequence assembly

and Keywords: biodiversity

6 materials found
  • e-learning

    Decontamination of a genome assembly

    • beginner
    Sequence assembly Genomics Biodiversity Assembly biodiversity
  • e-learning

    Assembly of the mitochondrial genome from PacBio HiFi reads

    • beginner
    Sequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity
  • e-learning

    Chloroplast genome assembly

    • beginner
    Sequence assembly Assembly biodiversity jbrowse1 nanopore plants
  • e-learning

    Large genome assembly and polishing

    • beginner
    Sequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    ERGA post-assembly QC

    • beginner
    Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.