Training materials
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e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Inferring single cell trajectories with Monocle3 (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerSingle Cell paper-replication plants -
e-learning
Inferring single cell trajectories with Monocle3
• beginnerMIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerSingle Cell work-in-progress -
e-learning
Scanpy Parameter Iterator
• beginnerSingle Cell -
e-learning
Single-cell quality control with scater
• beginnerSingle Cell work-in-progress -
e-learning
Downstream Single-cell RNA analysis with RaceID
• beginnerSingle Cell work-in-progress -
e-learning
Understanding Barcodes
• beginnerSingle Cell